Table 2 Sequencing and assembly results of the chloroplast genomes and nuclear targets from the 39 Magnoliaceae species
| Â | Â | Â | Â | Â | Chloroplast assembly | Â | Nuclear loci assembly | ||
|---|---|---|---|---|---|---|---|---|---|
Genus | Section | Subsection | Species | Base pairs (Gb) | Mean coverage | Length | Chloroplast accession | Mean coverage | Targets assembled (%) |
Magnolia | Gwillimia | Gwillimia | M. henryi | 673.65 | 2,346.05 | 159,760 | OR730771 | 129.83 | 239 (100%) |
Gynopodium | Gynopodium | M. kachirachirai | 763.59 | 2,714.55 | 160,042 | OR730772 | 81.08 | 239 (100%) | |
Kmeria | Kmeria | M. septentrionalis | 294.66 | 813.30 | 159,838 | OR730765 | 78.24 | 239 (100%) | |
Macrophylla | Â | M. dealbata | 566.90 | 2,010.76 | 160,069 | OR730743 | 70.32 | 239 (100%) | |
M. grandifloraa | 1,021.24 | NA | 161,903 | NC_020318a | 245.68 | 239 (100%) | |||
M. macrophylla | 501.49 | 1,651.14 | 160,087 | OR730773 | 85.91 | 239 (100%) | |||
M. rzedowskiana | 396.88 | 88.06 | 160,044 | OR730717 | 399.79 | 239 (100%) | |||
M. vovidesii | 504.88 | 92.58 | 160,075 | OR730707 | 480.51 | 239 (100%) | |||
Magnolia | Â | M. iltisiana | 527.74 | 71.42 | 159,672 | OR730694 | 516.45 | 239 (100%) | |
M. panamensis | 937.28 | 2,976.42 | 159,759 | OR730755 | 172.59 | 239 (100%) | |||
M. sharpii | 1,075.06 | 3,586.13 | 159,758 | OR730758 | 159.07 | 239 (100%) | |||
Manglietia | Manglietia | M. grandis | 466.32 | 1,217.12 | 160,046 | OR730775 | 132.88 | 239 (100%) | |
Michelia | Michelia | M. foveolata | 220.40 | 473.58 | 160,070 | OR730776 | 75.52 | 239 (100%) | |
Rytidospermum | Rytidospermum | M. obovata | 338.50 | 917.17 | 160,087 | OR730774 | 90.59 | 239 (100%) | |
Talauma | Cubenses | M. emarginatab | 254.80 | Â | 159,859 | OR730766 | 288.32 | 239 (100%) | |
M. splendens | 362.46 | 1,081.98 | 159,906 | OR730761 | 72.48 | 239 (100%) | |||
M. bankardiorum | 357.37 | 801.18 | 159,264 | OR730741 | 125.05 | 239 (100%) | |||
Talauma | Dugandiodendron | M. coronata | 444.62 | 53.54 | 159,223 | OR730676 | 457.59 | 239 (100%) | |
M. jaenensis | 339.10 | 65.37 | 159,277 | OR730695 | 379.65 | 239 (100%) | |||
M. ptaritepuiana | 823.93 | 77.93 | 159,188 | OR730713 | 816.14 | 239 (100%) | |||
Talauma | Talauma | M. allenii | 594.76 | 91.86 | 159,879 | OR730675 | 553.81 | 239 (100%) | |
Talauma | M. dodecapetala | 765.72 | 2,813.31 | 159,829 | OR730744 | 153.51 | 239 (100%) | ||
Talauma | M. kichuana | 275.34 | 718.39 | 159,888 | OR730749 | 78.28 | 239 (100%) | ||
Talauma | M. lacandonica | 453.55 | 42.65 | 159,906 | OR730767 | 458.49 | 239 (100%) | ||
Talauma | M. macrocarpa | 79.66 | 48.92 | 159,841 | OR730698 | 124.05 | 239 (100%) | ||
Talauma | M. mexicana | 457.47 | 117.34 | 159,847 | OR730700 | 399.95 | 239 (100%) | ||
Talauma | M. ofeliae | 392.61 | 67.37 | 159,839 | OR730705 | 380.74 | 239 (100%) | ||
Talauma | M. ovata | 476.35 | 32.76 | 159,782 | OR730768 | 104.55 | 239 (100%) | ||
Talauma | M. pastazaensis | 317.30 | 910.24 | 159,811 | OR730756 | 86.97 | 239 (100%) | ||
Talauma | M. rimachii | 384.58 | 66.32 | 159,829 | OR730715 | 388.68 | 239 (100%) | ||
Talauma | M. silvioi | 1,267.35 | 104.60 | 159,835 | OR730719 | 1,092.30 | 239 (100%) | ||
Talauma | M. virolinensis | 680.10 | 53.34 | 159,704 | OR730728 | 650.15 | 239 (100%) | ||
Talauma | M. wetteri | 455.86 | 71.16 | 159,811 | OR730733 | 432.20 | 239 (100%) | ||
Talauma | M. wolfii | 1,034.72 | 77.38 | 159,678 | OR730734 | 871.23 | 239 (100%) | ||
Talauma | M. zamorana | 631.89 | 2,222.86 | 159,758 | OR730740 | 79.68 | 239 (100%) | ||
Talauma | M. zoquepopolucae | 486.06 | 105.34 | 159,842 | OR730763 | 422.66 | 239 (100%) | ||
Yulania | Tulipastrum | M. acuminata | 333.53 | 1,007.07 | 159,814 | OR730769 | 66.68 | 239 (100%) | |
Yulania | M. biondii | 157.24 | 416.25 | 160,014 | OR730770 | 36.41 | 239 (100%) | ||
Liriodendron | Â | Â | L. tulipiferaa | 992.91 | NA | 162,170 | DQ899947a | 90.35 | 239 (100%) |