Table 2 Genes associated with environmental variables and detected as outliers

PSME_03744

AT1G72470

EXOCYST SUBUNIT EXO70 FAMILY PROTEIN D1 (EXO70D1)

seq-rs8794-DF

TD, EMT

PSME_09672

AT5G26600

Pyridoxal phosphate (PLP)-dependent transferase protein

seq-rs7221-DF

MSP, CMD

PSME_11002

AT4G14950

KILLING ME SLOWLY 1 (KMS1)

seq-rs5525-DF

TD, bFFP, EMT, MAR

PSME_13942

AT5G58610

PHD finger transcription factor

seq-rs2638-DF

TD, MAR

PSME_15259

AT4G15020

hAT transposon superfamily

seq-rs11624-DF

TD, EMT, MAR

PSME_16148

AT1G69040

ACT DOMAIN REPEAT 4 (ACR4)

seq-rs2413-DF

MCMT, TD, bFFP, EMT, MAR

PSME_17634

AT1G65010

Microtubule-associated protein

seq-rs7694-DF

DD18, DD1040

PSME_18531

AT5G52390

PAR1 protein

seq-rs14799-DF

MAT

PSME_19641

AT2G13600

SLOW GROWTH 2 (SLO2)

seq-rs20280-DF

MAT, NFFD, FFP, PAS

PSME_19644

AT2G28080

TARGETS UNDER ETTIN CONTROL3 (TEC3)

seq-rs12377-DF, seq-rs12378-DF

MCMT, TD, EMT, MAT, DD_0, DD5, DD_18, bFFP, FFP

PSME_21214

AT3G07350

Phosphorus (P) stress-inducible DUF506 gene

seq-rs404-DF

EMT

PSME_23343

AT3G17450

hAT dimerization domain-containing protein

seq-rs5518-DF

MCMT, TD, DD_18, bFFP, FFP, EMT, MAR

PSME_23814

AT3G48060

BAH and TFIIS domain-containing protein

seq-rs3329-DF, seq-rs3331-DF

MAR

PSME_25837

AT1G71050

HEAVY METAL ASSOCIATED ISOPRENYLATED PLANT PROTEIN 20 (HIPP20)

seq-rs15203-DF

TD, FFP, MAR

PSME_26257

AT3G13460

EVOLUTIONARILY CONSERVED C-TERMINAL REGION 2 (ECT2)

seq-rs12858-DF, seq-rs12859-DF

MCMT, TD, DD_0, DD_18, bFFP, FFP, EMT, MAR

PSME_26527

AT3G17450

hAT dimerization domain-containing protein

seq-rs6469-DF

DD_0

PSME_26913

AT3G17450

hAT dimerization domain-containing protein

seq-rs24300-DF

DD5, bFFP, FFP, MAR

PSME_27258

AT4G21960

PRXR1

seq-rs5609-DF

TD, MAR

PSME_27924

AT3G17450

hAT dimerization domain-containing protein

seq-rs16255-DF

MAR

PSME_28111

AT4G25610

C2H2-like zinc finger protein

seq-rs12212-DF

MAT, DD_0

PSME_30358

AT4G33240

FORMS APLOID AND BINUCLEATE CELLS 1 A (FAB1A)

seq-rs2130-DF

MAR

PSME_31523

AT1G68150

WRKY DNA-BINDING PROTEIN 9 (WRKY9)

seq-rs5088-DF

TD, MAP, MSP

PSME_32133

AT3G12250

TGACG MOTIF-BINDING FACTOR 6 (TGA6)

seq-rs6065-DF

MAT, DD5, CMD, DD1040

PSME_36236

AT3G45630

RNA binding (RRM/RBD/RNP motifs) protein

seq-rs3467-DF

MAT, MCMT, TD, DD_0, DD_18, bFFP, FFP, EMT, MAR

PSME_37507

AT2G27900

Coiled-coil protein

seq-rs14589-DF

DD_0

PSME_38327

AT2G07690

MINICHROMOSOME MAINTENANCE 5 (MCM5)

seq-rs15648-DF

DD_0

PSME_40364

AT4G39420

Spatacsin carboxy-terminus protein

seq-rs4908-DF, seq-rs4906-DF, seq-rs4909-DF, seq-rs4901-DF, seq-rs4902-DF, seq-rs4905-DF

MAR

PSME_42442

AT3G18110

EMBRYO DEFECTIVE 1270 (EMB1270)

seq-rs15950-DF, seq-rs15954-DF

DD_0, MCMT, MAT

PSME_46484

AT5G20480

EF-TU RECEPTOR (EFR)

seq-rs6514-DF

TD, DD_0, EMT

PSME_46939

AT4G15020

hAT transposon superfamily

seq-rs10937-DF

DD_0

PSME_48792

AT4G26640

WRKY Transcription Factor 20

seq-rs3486-DF, seq-rs3487-DF

MAT, MCMT, TD, DD_0, DD_18, bFFP, FFP, EMT, MAR

PSME_50000

AT1G13580

LAG1 LONGEVITY ASSURANCE HOMOLOG 3 (LAG13)

seq-rs6971-DF

TD, bFFP, EMT, MAR

PSME_50606

AT3G17450

hAT dimerization domain-containing protein

seq-rs6498-DF

MAT, DD5, FFP, DD1040

PSME_50684

AT4G03400

DWARF IN LIGHT 2 (DFL2)

seq-rs15961-DF

MCMT, TD, EMT, MAR

PSME_50787

AT4G15020

hAT transposon superfamily

seq-rs14879-DF

MCMT

PSME_51247

AT4G39420

Spatacsin carboxy-terminus protein

seq-rs2918-DF