Table 1 Selection frequency for species included in the Arthropoda OTU, Number of sequences per species and their corresponding frequency in the two datasets used for Figures 5 and 6 and constructed according to two different selection criteria: longest sequence (LC) or smallest evolutionary distance (SC)
From: SCaFoS: a tool for Selection, Concatenation and Fusion of Sequences for phylogenomics
LC | SC | |||
|---|---|---|---|---|
number of sequences | frequency | number of sequences | frequency | |
Drosophila melanogaster | 133 | 95% | 16 | 11% |
Anopheles gambiae | 3 | 2% | 34 | 24% |
Bombyx mori | 1 | 1% | 12 | 9% |
Litopenaeus vannamei | 1 | 1% | 2 | 1% |
Hypsibius dujardini | 1 | 1% | 3 | 2% |
Myzus persicae | 1 | 1% | ||
Tribolium castaneum | 11 | 8% | ||
Apis mellifera | 9 | 6% | ||
Spodoptera frugiperda | 8 | 6% | ||
Amblyomma americanum | 7 | 5% | ||
Ctenocephalides felis | 7 | 5% | ||
Mesobuthus gibbosus | 6 | 4% | ||
Ornithodoros porcinus | 5 | 4% | ||
Manduca sexta | 4 | 3% | ||
Glossina morsitans | 3 | 2% | ||
Toxoptera citricida | 3 | 2% | ||
Callosobruchus maculatus | 3 | 2% | ||
Curculio glandium | 2 | 1% | ||
Acyrthosiphon pisum | 1 | 1% | ||
Ips pini | 1 | 1% | ||
Biphyllus lunatus | 1 | 1% | ||
Dermacentor variabilis | 1 | 1% | ||
Clytus arietis | 1 | 1% | ||